Eddy covariance tracker

Since the first proof-of-concept study in 2003, aquatic eddy covariance has gained popularity and is nowadays being used by a number of research groups worldwide to investigate aquatic productivity.

This page aims to keep track of publications using this technology. Kindly get in touch if we have missed any studies.

Research involving SDU is highlighted in bold

Peer-reviewed articles

  1. Berg et al. (2003) Oxygen uptake by aquatic sediments measured with a novel non-invasive eddy-correlation technique. Marine Ecology Progress Series https://www.int-res.com/abstracts/meps/v261/p75-83/

  2. Kuwae et al. (2006) Oxygen exchange flux between sediment and water in an intertidal sandflat, measured in situ by the eddy-correlation method. Marine Ecology Progress Series https://www.int-res.com/articles/meps_oa/m307p059.pdf

  3. Berg et al. (2007) Eddy correlation flux measurements: The sediment surface area that contributes to the flux. Limnology and Oceanography https://pure.mpg.de/rest/items/item_2485471/component/file_3275823/content

  4. Berg and Huettel (2008) Monitoring the Seafloor Using the Noninvasive Eddy Correlation Technique: Integrated Benthic Exchange Dynamics. Oceanography https://tos.org/oceanography/article/monitoring-the-seafloor-using-the-noninvasive-eddy-correlation-technique-in

  5. Brand et al. (2008) Intermittent oxygen flux from the interior into the bottom boundary of lakes as observed by eddy correlation. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lo.2008.53.5.1997

  6. Crusius et al. (2008) Eddy correlation measurements of submarine groundwater discharge. Marine Chemistry https://www.sciencedirect.com/science/article/abs/pii/S0304420307002940

  7. McGinnis et al. (2008) Measurements of eddy correlation oxygen fluxes in shallow freshwaters: Towards routine applications and analysis. Geophysical Research Letters https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2007GL032747

  8. Berg et al. (2009) Eddy correlation measurements of oxygen uptake in deep ocean sediments. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lom.2009.7.576

  9. Glud et al. (2010) Benthic O2 exchange across hard-bottom substrates quantified by eddy correlation in a sub-Arctic fjord. Marine Ecology Progress Series https://www.int-res.com/abstracts/meps/v417/p1-12/

  10. Lorrai et al. (2010) Application of Oxygen Eddy Correlation in Aquatic Systems. Journal of Atmospheric and Oceanic Technology https://journals.ametsoc.org/view/journals/atot/27/9/2010jtecho723_1.xml

  11. Hume et al. (2011) Dissolved oxygen fluxes and ecosystem metabolism in an eelgrass (Zostera marina) meadow measured with the eddy correlation technique. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/10.4319/lo.2011.56.1.0086

  12. Johnson et al. (2011) Nitrate and oxygen flux across the sediment-water interface observed by eddy correlation measurements on the open continental shelf. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lom.2011.9.543

  13. McGinnis et al. (2011) Simple, robust eddy correlation amplifier for aquatic dissolved oxygen and hydrogen sulfide flux measurements. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lom.2011.9.340

  14. Chipman et al. (2012) Oxygen optodes as fast sensors for eddy correlation measurements in aquatic systems. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lom.2012.10.304

  15. Long et al. (2012) Oxygen exchange and ice melt measured at the ice-water interface by eddy correlation. Biogeosciences https://bg.copernicus.org/articles/9/1957/2012/bg-9-1957-2012.html

  16. Lorke et al. (2012) Effect of ship locking on sediment oxygen uptake in impounded rivers. Water Resources Research https://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2012WR012483

  17. Reimers et al. (2012) Benthic oxygen consumption rates during hypoxic conditions on the Oregon continental shelf: Evaluation of the eddy correlation method. Journal of Geophysical Research https://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2011JC007564

  18. Berg et al. (2013) Eddy correlation measurements of oxygen fluxes in permeable sediments exposed to varying current flow and light. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lo.2013.58.4.1329

  19. Holtappels et al. (2013) Effects of transient bottom water currents and oxygen concentrations on benthic exchange rates as assessed by eddy correlation measurements. Journal of Geophysical Research: Oceans https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/jgrc.20112

  20. Long et al. (2013) In Situ Coral Reef Oxygen Metabolism: An Eddy Correlation Study. PLOS one https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0058581

  21. Lorke et al. (2013) Eddy-correlation measurements of benthic fluxes under complex flow conditions: Effects of coordinate transformations and averaging time scales. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lom.2013.11.425

  22. Reidenbach et al. (2013) Hydrodynamics of intertidal oyster reefs: The influence of boundary layer flow processes on sediment and oxygen exchange. Limnology and Oceanography: Fluids and Environment https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1215/21573689-2395266

  23. Rheuban and Berg (2013) The effects of spatial and temporal variability at the sediment surface on aquatic eddy correlation flux measurements. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lom.2013.11.351

  24. Attard et al. (2014) Seasonal rates of benthic primary production in a Greenland fjord measured by aquatic eddy correlation. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lo.2014.59.5.1555

  25. Glud et al. (2014) Biological- and physical-induced oxygen dynamics in melting sea ice of the Fram Strait. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lo.2014.59.4.1097

  26. Kreling et al. (2014) Physical controls of oxygen fluxes at pelagic and benthic oxyclines in a lake. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lo.2014.59.5.1637

  27. McCann-Grosvenor et al. (2014) Dynamics of the benthic boundary layer and seafloor contributions to oxygen depletion on the Oregon inner shelf. Continental Shelf Research https://www.sciencedirect.com/science/article/abs/pii/S0278434314001915

  28. McGinnis et al. (2014) Quantifying tidally driven benthic oxygen exchange across permeable sediments: An aquatic eddy correlation study. Journal of Geophysical Research: Oceans https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2014JC010303

  29. Murniati et al. (2014) Short-term and seasonal variability of oxygen fluxes at the sediment–water interface in a riverine lake. Aquatic Sciences https://link.springer.com/article/10.1007/s00027-014-0362-7

  30. Rheuban et al. (2014) Ecosystem metabolism along a colonization gradient of eelgrass (Zostera marina) measured by eddy correlation. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/abs/10.4319/lo.2014.59.4.1376

  31. Rheuban et al. (2014) Multiple timescale processes drive ecosystem metabolism in eelgrass (Zostera marina) meadows. Marine Ecology Progress Series https://www.int-res.com/abstracts/meps/v507/p1-13/

  32. Attard et al. (2015) Benthic oxygen exchange in a live coralline algal bed and an adjacent sandy habitat: an eddy covariance study. Marine Ecology Progress Series https://www.int-res.com/abstracts/meps/v535/p99-115/

  33. Berg et al. (2015) A new robust oxygen-temperature sensor for aquatic eddy covariance measurements. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lom3.10071

  34. Berg et al. (2015) Technical Note: Time lag correction of aquatic eddy covariance data measured in the presence of waves. Biogeosciences https://bg.copernicus.org/articles/12/6721/2015/

  35. Cathalot et al. (2015) Cold-water coral reefs and adjacent sponge grounds: hotspots of benthic respiration and organic carbon cycling in the deep sea. Frontiers in Marine Science https://www.frontiersin.org/articles/10.3389/fmars.2015.00037/full

  36. Donis et al. (2015) An Assessment of the Precision and Confidence of Aquatic Eddy Correlation Measurements. Journal of Atmospheric and Oceanic Technology https://journals.ametsoc.org/view/journals/atot/32/3/jtech-d-14-00089_1.xml

  37. Else et al. (2015) Under-ice eddy covariance flux measurements of heat, salt, momentum, and dissolved oxygen in an artificial sea ice pool. Cold Regions Science and Technology https://www.sciencedirect.com/science/article/abs/pii/S0165232X15001470

  38. Holtappels et al. (2015) Aquatic Eddy Correlation: Quantifying the Artificial Flux Caused by Stirring-Sensitive O2 Sensors. PLOS one https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0116564

  39. Koopmans and Berg (2015) Stream oxygen flux and metabolism determined with the open water and aquatic eddy covariance techniques. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/lno.10103

  40. Long et al. (2015) Seagrass metabolism across a productivity gradient using the eddy covariance, Eulerian control volume, and biomass addition techniques. Journal of Geophysical Research: Oceans. https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2014JC010352

  41. Long et al. (2015) Oxygen metabolism and pH in coastal ecosystems: Eddy Covariance Hydrogen ion and Oxygen Exchange System (ECHOES). Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lom3.10038

  42. Long et al. (2015) Sub-tropical seagrass ecosystem metabolism measured by eddy covariance. Marine Ecology Progress Series https://www.int-res.com/articles/meps_oa/m529p075.pdf

  43. Rovelli et al. (2015) Benthic O2 uptake of two cold-water coral communities estimated with the non-invasive eddy correlation technique. Marine Ecology Progress Series https://www.int-res.com/articles/meps_oa/m525p097.pdf

  44. Yamamoto et al. (2015) Total alkalinity flux in coral reefs estimated from eddy covariance and sediment pore-water profiles. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.10018

  45. Attard et al. (2016) Benthic primary production and mineralization in a High Arctic fjord: in situ assessments by aquatic eddy covariance. Marine Ecology Progress Series https://www.int-res.com/articles/meps_oa/m554p035.pdf

  46. Chipman et al. (2016) Benthic Oxygen Fluxes Measured by Eddy Covariance in Permeable Gulf of Mexico Shallow-Water Sands. Aquatic Geochemistry https://link.springer.com/article/10.1007/s10498-016-9305-3

  47. Donis et al. (2016) Assessing benthic oxygen fluxes in oligotrophic deep sea sediments (HAUSGARTEN observatory). Deep Sea Research https://www.sciencedirect.com/science/article/abs/pii/S0967063716300292

  48. Glud et al. (2016) Benthic Carbon Mineralization and Nutrient Turnover in a Scottish Sea Loch: An Integrative In Situ Study. Aquatic Geochemistry https://link.springer.com/article/10.1007/s10498-016-9300-8

  49. Kokic et al. (2016) Low sediment-water gas exchange in a small boreal lake. Journal of Geophysical Research: Biogeosciences https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2016JG003372

  50. Reimers et al. (2016) Microelectrode Velocity Effects and Aquatic Eddy Covariance Measurements Under Waves. Journal of Atmospheric and Oceanic Technology https://journals.ametsoc.org/view/journals/atot/33/2/jtech-d-15-0041_1.xml

  51. Reimers et al. (2016) The Dynamics of Benthic Respiration at a Mid-Shelf Station Off Oregon. Aquatic Geochemistry https://link.springer.com/article/10.1007/s10498-016-9303-5

  52. Berg and Pace (2017) Continuous measurement of air–water gas exchange by underwater eddy covariance. Biogeosciences https://bg.copernicus.org/articles/14/5595/2017/

  53. Lee et al. (2017) Estimation of Net Ecosystem Metabolism of Seagrass Meadows in the Coastal Waters of the East Sea and Black Sea using the Noninvasive Eddy Covariance Technique. Ocean Science Journal https://link.springer.com/article/10.1007/s12601-017-0032-5

  54. Lemaire et al. (2017) Towards relaxed eddy accumulation measurements of sediment-water exchange in aquatic ecosystems. Geophysical Research Letters https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2017GL074625

  55. Long and Nicholson (2017) Surface gas exchange determined from an aquatic eddy covariance floating platform. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lom3.10233

  56. Berg et al. (2017) Non-invasive Monitoring at the Benthic Interface: the Aquatic Eddy Covariance Technique. Limnology and Oceanography e-Lectures https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/loe2.10005

  57. Rovelli et al. (2017) Reach-scale river metabolism across contrasting sub-catchment geologies: Effect of light and hydrology. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.10619

  58. Weck and Lorke (2017) Mixing efficiency in the thermocline of lakes observed from eddy correlation flux measurements. Journal of Geophysical Research: Oceans https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2016JC012188

  59. Attard et al. (2018) Oxygen fluxes beneath Arctic land‑fast ice and pack ice: towards estimates of ice productivity. Polar Biology https://link.springer.com/article/10.1007/s00300-018-2350-1

  60. Merikhi et al. (2018) Jet-nozzle method for measuring response times of scalar sensors used in liquids and gases. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lom3.10259

  61. Volaric et al. (2018) Oxygen metabolism of intertidal oyster reefs measured by aquatic eddy covariance. Marine Ecology Progress Series https://www.int-res.com/abstracts/meps/v599/p75-91

  62. Attard et al. (2019) Seasonal ecosystem metabolism across shallow benthic habitats measured by aquatic eddy covariance. Limnology and Oceanography Letters https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lol2.10107

  63. Attard et al. (2019) Seasonal metabolism and carbon export potential of a key coastal habitat: The perennial canopy-forming macroalga Fucus vesiculosus. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.11026

  64. Berg et al. (2019) Dynamics of benthic metabolism, O2, and pCO2 in a temperate seagrass meadow. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.11236

  65. Long et al. (2019) Ebullition of oxygen from seagrasses under supersaturated conditions. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.11299

  66. Long et al. (2019) Closing the oxygen mass balance in shallow coastal ecosystems. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.11248

  67. Plew (2019) Investigating benthic impacts at salmon farms using eddy covariance measurements of benthic oxygen fluxes. Aquaculture Environment Interactions https://www.int-res.com/abstracts/aei/v11/p337-357/

  68. Rodil et al. (2019) Towards a sampling design for characterizing habitat-specific benthic biodiversity related to oxygen flux dynamics using Aquatic Eddy Covariance. PLOS one https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0211673

  69. Volaric et al. (2019) An invasive macroalga alters ecosystem metabolism and hydrodynamics on a tidal flat. Marine Ecology Progress Series https://www.int-res.com/articles/feature/m628p001.pdf

  70. Attard and Glud (2020) Technical Note: Estimating light-use efficiency of benthic habitats using underwater O2 eddy covariance. Biogeosciences https://bg.copernicus.org/articles/17/4343/2020/

  71. Attard et al. (2020) Metabolism of a subtidal rocky mussel reef in a high-temperate setting: pathways of organic C flow. Marine Ecology Progress Series https://www.int-res.com/abstracts/meps/v645/p41-54/

  72. Berger et al. (2020) Long-term trends and resilience of seagrass metabolism: A decadal aquatic eddy covariance study. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lno.11397

  73. Koopmans et al. (2020) High Net Primary Production of Mediterranean Seagrass (Posidonia oceanica) Meadows Determined With Aquatic Eddy Covariance. Frontiers in Marine Science https://www.frontiersin.org/articles/10.3389/fmars.2020.00118/full

  74. Hu and Hemond (2020) A Multi-Function Sensor for Eddy Correlation Measurements of Benthic Flux. IEEE Sensors https://ieeexplore.ieee.org/document/8865133

  75. Owen et al. (2020) Taxon-specific primary production rates on coral reefs in the Florida Keys. Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/lno.11627

  76. Rodil et al. (2020) Estimating Respiration Rates and Secondary Production of Macrobenthic Communities Across Coastal Habitats with Contrasting Structural Biodiversity. Ecosystems https://link.springer.com/article/10.1007/s10021-019-00427-0

  77. Volaric et al. (2020) Drivers of Oyster Reef Ecosystem Metabolism Measured Across Multiple Timescales using the Non-Invasive Aquatic Eddy Covariance Technique. Estuaries and Coasts https://link.springer.com/article/10.1007/s12237-020-00745-w

  78. Huettel et al. (2020) Technical note: measurements and data analysis of sediment-water oxygen flux using a new dual-optode eddy covariance instrument. Biogeosciences https://bg.copernicus.org/articles/17/4459/2020/

  79. Berg et al. (2020) Air-water gas exchange in lakes and reservoirs measured from a moving platform by underwater eddy covariance. Limnology and Oceanography: Methods https://aslopubs.onlinelibrary.wiley.com/doi/full/10.1002/lom3.10373

  80. Camillini et al. (2021) Resolving community metabolism of eelgrass (Zostera marina) meadows by benthic flume-chambers and eddy covariance in dynamic coastal environments. Marine Ecology Progress Series https://doi.org/10.3354/meps13616

  81. Reimers et al. (2020) Benthic fluxes of oxygen and heat from a seasonally hypoxic region of Saanich Inlet fjord observed by eddy covariance. Estuarine, Coastal and Shelf Science https://www.sciencedirect.com/science/article/pii/S0272771420301086

  82. Rodil et al. (2021) Variable contributions of seafloor communities to ecosystem metabolism across a gradient of habitat-forming species. Marine Environmental Research https://doi.org/10.1016/j.marenvres.2021.105321

  83. Reimers and Fogaren (2021) Bottom Boundary Layer Oxygen Fluxes During Winter on the Oregon Shelf. Journal of Geophysical Research Oceans https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2020JC016828

  84. Koopmans et al. (2021) Seiche- and storm-driven benthic oxygen uptake in a eutrophic freshwater estuary determined with aquatic eddy covariance. Freshwater Science https://www.journals.uchicago.edu/doi/10.1086/714542

  85. Merikhi et al. (2021). Technical note: Novel triple O2 sensor aquatic eddy covariance instrument with improved time shift correction reveals central role of microphytobenthos for carbon cycling in coral reef sands. Biogeosciences https://bg.copernicus.org/articles/18/5381/2021/bg-18-5381-2021.html

  86. Koopmans et al. (2021) Detection and quantification of a release of carbon dioxide gas at the seafloor using pH eddy covariance and measurements of plume advection. International Journal of Greenhouse Gas Control https://www.sciencedirect.com/science/article/pii/S1750583621002280

  87. Amo-Seco et al. (2021) Benthic O2 fluxes in the NW Iberian coastal upwelling system measured with aquatic eddy covariance and benthic chamber techniques. Marine Ecology Progress Series https://www.int-res.com/articles/meps_oa/m670p015.pdf

  88. Long (2021) Aquatic biogeochemical eddy covariance fluxes in the presence of waves. Journal of Geophysical Research: Oceans https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2020JC016637

  89. Zhang et al. (2021) Eddy correlation measurements of benthic oxygen fluxes in a stratified and operated reservoir. Journal of Hydrology https://www.sciencedirect.com/science/article/abs/pii/S0022169421000548?via%3Dihub

  90. Berg et al. (2022) Aquatic eddy covariance: The method and its contributions to defining oxygen and carbon fluxes in marine environments. Annual Review of Marine Science https://www.annualreviews.org/doi/full/10.1146/annurev-marine-042121-012329

  91. Rodil et al. (2022) Positive contribution of macrofaunal biodiversity to secondary production and seagrass carbon metabolism. Ecology. https://doi.org/10.1002/ecy.3648

  92. Juska and Berg (2022). Variation in seagrass meadow respiration measured by aquatic eddy covariance. Limnology and Oceanography Letters https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/lol2.10276

  93. Coogan et al. (2022) Evaluating benthic flux measurements from a gradient flux system. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10482

  94. Rovelli et al. (2022) Benthic O2 uptake by coral gardens at the Condor seamount (Azores). Marine Ecology Progress Series https://www.int-res.com/articles/meps_oa/m688p019.pdf

  95. Granville et al. (2023). A high-resolution submersible oxygen optode system for aquatic eddy covariance. Limnology and Oceanography: Methods https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/lom3.10535

  96. Attard et al. (2023) High metabolism and periodic hypoxia associated with drifting macrophyte detritus in the shallow subtidal Baltic Sea. Biogeosciences https://bg.copernicus.org/articles/20/1713/2023/

  97. Arrill et al. (2023) Toward a New Era of Coral Reef Monitoring. Environmental Science and Technology https://pubs.acs.org/doi/full/10.1021/acs.est.2c05369

  98. Coogan and Long (2023) Development and deployment of a long-term aquatic eddy covariance system. Limnology and Oceanography Methods https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10564

  99. Calabro-Souza et al. (2023) A new technique for resolving benthic solute fluxes: Evaluation of conditional sampling using aquatic relaxed eddy accumulation. Earth and Space Science https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2023EA003041

  100. Apprill et al. (2023) Toward a new era of coral reef monitoring. Environmental Science and Technology https://doi.org/10.1021/acs.est.2c05369

  101. Lohrer et al. (2024) Implications of increased intertidal inundation on seagrass net primary production. Estuarine, Coastal and Shelf Science https://doi.org/10.1016/j.ecss.2024.108636

  102. Kindeberg et al. (2024) Structural complexity and benthic metabolism: resolving the links between carbon cycling and biodiversity in restored seagrass meadows. Biogeosciences https://doi.org/10.5194/bg-21-1685-2024

  103. Attard et al. (2024) Seafloor primary production in a changing Arctic Ocean. Proceedings of the National Academy of Sciences https://doi.org/10.1073/pnas.2303366121

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